Search results for "ecological genetics"

showing 9 items of 9 documents

Ecological genomics of adaptation to unpredictability in experimental rotifer populations

2019

AbstractElucidating the genetic basis of phenotypic variation in response to different environments is key to understanding how populations evolve. Facultatively sexual rotifers can develop adaptive responses to fluctuating environments. In a previous evolution experiment, diapause-related traits changed rapidly in response to two selective regimes (predictable vs unpredictable) in laboratory populations of the rotifer Brachionus plicatilis. Here, we investigate the genomic basis of adaptation to environmental unpredictability in these experimental populations. We identified and genotyped genome-wide polymorphisms in 169 clones from both selective regimes after seven cycles of selection usi…

0106 biological sciences0301 basic medicineAcclimatizationRotiferalcsh:MedicineGenomicsSingle-nucleotide polymorphismEvolutionary ecologyPolymorphism Single Nucleotide010603 evolutionary biology01 natural sciencesArticle03 medical and health sciencesAnimalsSelection Geneticlcsh:ScienceGenetic Association StudiesSelection (genetic algorithm)GenomeMultidisciplinarybiologylcsh:REcological geneticsBrachionusEcological geneticsbiology.organism_classificationPhenotype030104 developmental biologyEvolutionary biologylcsh:QEvolutionary ecologyAdaptationDatabases Nucleic AcidScientific Reports
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Using metabarcoding to reveal and quantify plant-pollinator interactions.

2016

AbstractGiven the ongoing decline of both pollinators and plants, it is crucial to implement effective methods to describe complex pollination networks across time and space in a comprehensive and high-throughput way. Here we tested if metabarcoding may circumvent the limits of conventional methodologies in detecting and quantifying plant-pollinator interactions. Metabarcoding experiments on pollen DNA mixtures described a positive relationship between the amounts of DNA from focal species and the number of trnL and ITS1 sequences yielded. The study of pollen loads of insects captured in plant communities revealed that as compared to the observation of visits, metabarcoding revealed 2.5 tim…

0106 biological sciences0301 basic medicineInsectaDNA PlantPollinationmedia_common.quotation_subjectInsectBiologymedicine.disease_cause010603 evolutionary biology01 natural sciencesArticle03 medical and health sciencesSpecies SpecificityPollinatorPollenmedicine[ SDV.EE.IEO ] Life Sciences [q-bio]/Ecology environment/SymbiosisAnimalsDNA Barcoding TaxonomicPollinationPlant Physiological Phenomenamedia_common[SDV.GEN]Life Sciences [q-bio]/Genetics[ SDE.BE ] Environmental Sciences/Biodiversity and EcologyMultidisciplinaryCommunityEcologyPlant communitySequence Analysis DNAPlants15. Life on landEcological genetics030104 developmental biologyTaxonPollen[SDE.BE]Environmental Sciences/Biodiversity and Ecology[ SDV.GEN ] Life Sciences [q-bio]/Genetics[SDV.EE.IEO]Life Sciences [q-bio]/Ecology environment/Symbiosis
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Analysis of heteroplasmy in bank voles inhabiting the Chernobyl exclusion zone : A commentary on Baker et al. (2017) "Elevated mitochondrial genome v…

2018

0106 biological sciences0301 basic medicineMitochondrial DNARodentmetsämyyräecological geneticsevoluutio010603 evolutionary biology01 natural sciences03 medical and health sciencesMolecular evolutionbiology.animalGeneticsExclusion zoneEcology Evolution Behavior and Systematicsbiologymolecular evolutionsäteilyPopulation ecologyEcological geneticsgeneettinen muunteluHeteroplasmypopulaatioekologia030104 developmental biologyVariation (linguistics)Evolutionary biologypopulation ecologyCommentaryta1181mutaatiotGeneral Agricultural and Biological SciencesEvolutionary Applications
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Susceptibility to infection with Borrelia afzelii and TLR2 polymorphism in a wild reservoir host

2019

AbstractThe study of polymorphic immune genes in host populations is critical for understanding genetic variation in susceptibility to pathogens. Controlled infection experiments are necessary to separate variation in the probability of exposure from genetic variation in susceptibility to infection, but such experiments are rare for wild vertebrate reservoir hosts and their zoonotic pathogens. The bank vole (Myodes glareolus) is an important reservoir host of Borrelia afzelii, a tick-borne spirochete that causes Lyme disease. Bank vole populations are polymorphic for Toll-like receptor 2 (TLR2), an innate immune receptor that recognizes bacterial lipoproteins. To test whether the TLR2 polym…

MaleNymph0301 basic medicinemetsämyyrälcsh:MedicineTickBorrelia afzeliimedicine.disease_causeinfektiotgenotyyppiArticle03 medical and health sciencesTicks0302 clinical medicineLyme diseaseBorrelia burgdorferi GroupPolymorphism (computer science)GenotypeGenetic variationparasitic diseasesisäntäeläimetImmunogeneticsmedicineAnimalsimmuniteettiGenetic Predisposition to Diseaselcsh:ScienceDisease ReservoirsGeneticsLyme DiseasePolymorphism GeneticMultidisciplinaryInnate immune systembiologyArvicolinaelcsh:REcological geneticsmedicine.diseasebiology.organism_classificationbacterial infections and mycosesToll-Like Receptor 2Borrelia-bakteeritBank vole030104 developmental biology[SDV.MP]Life Sciences [q-bio]/Microbiology and ParasitologyFemalelcsh:Q030217 neurology & neurosurgeryClethrionomys
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Seasonal gene expression kinetics between diapause phases in Drosophila virilis group species and overwintering differences between diapausing and no…

2015

AbstractMost northern insect species experience a period of developmental arrest, diapause, which enables them to survive over the winter and postpone reproduction until favorable conditions. We studied the timing of reproductive diapause and its long-term effects on the cold tolerance of Drosophila montana, D. littoralis and D. ezoana females in seasonally varying environmental conditions. At the same time we traced expression levels of 219 genes in D. montana using a custom-made microarray. We show that the seasonal switch to reproductive diapause occurs over a short time period and that overwintering in reproductive diapause has long-lasting effects on cold tolerance. Some genes, such as…

Period (gene)media_common.quotation_subjectPhotoperiodAdaptation BiologicalZoologyInsectDiapauseDiapause InsectArticleGenetiikka kehitysbiologia fysiologia - Genetics developmental biology physiologyLääketieteen bioteknologia - Medical biotechnologyBotanyAnimalsgeeniekspressioOverwinteringmedia_commonphotoperiodismMultidisciplinarybiologyta1184ReproductionTemperatureEcological geneticsbiology.organism_classificationDrosophila virilisGene Expression Regulationta1181DrosophilaFemaleGene expressionSeasonsAdaptationReproductionTranscriptionScientific reports
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Review paper: Ecological genetics of Brachionus sympatric sibling species

1998

In this paper we review previous studies on sympatric Brachionus populations in Torreblanca Marsh as a model of evolutionary and ecological relationships between closely related species. The marsh is a wetland on the Mediterranean coast of Spain with high spatial and temporal heterogeneity. Allozyme and morphometric analysis showed that Brachionus group plicatilis (formerly, Brachionus plicatilis and currently split into B. plicatilis and B. rotundiformis) was composed of three groups of genotypes with no evidence of gene flow between them (B. plicatilis, B. rotundiformis SM and B. rotundiformis SS). Correlations between seasonal and spatial distributions, on one hand, and temperature and s…

Sympatryeducation.field_of_studybiologyEcologyPopulationZoologyBrachionusbiology.organism_classificationEcological geneticsMating preferencesGenetic divergenceSympatric speciationMatingeducation
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Analysis of heteroplasmy in bank voles inhabiting the Chernobyl exclusion zone : A commentary on Baker et al. (2017) "Elevated mitochondrial genome v…

2018

ecological geneticsmolecular evolutionmetsämyyräpopulation ecologyevoluutiosäteilymutaatiotgeneettinen muuntelupopulaatioekologia
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Ecological genetics of a cyclical parthenogen in temporary habitats

1995

Populations of the rotifer Brachionus plicatilis inhabiting three temporary ponds in Torreblanca Marsh (Castellon, Spain) were regularly screened for allozyme variation, sexual reproduction levels and population densities during an annual cycle. Relevant ecological parameters in the ponds were also recorded. The electrophoretic survey of the three ponds (Poza Sur, Poza Norte and Canal Central) revealed a high level of overall genetic polymorphism in four marker loci, but only 13 multilocus genotypes were found. We classified clones into three clonal groups (SS, SM, L) characterized by unique arrays of alleles in the four marker loci, and significant differences in body shape and size. Clona…

education.field_of_studySpecies complexbiologyEcologyPopulationEcological successionBrachionusbiology.organism_classificationEcological geneticsPopulation densityGene flowSexual reproductioneducationEcology Evolution Behavior and SystematicsJournal of Evolutionary Biology
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The impact of life stage and pigment source on the evolution of novel warning signal traits

2021

Our understanding of how novel warning color traits evolve in natural populations is largely based on studies of reproductive stages and organisms with endogenously produced pigmentation. In these systems, genetic drift is often required for novel alleles to overcome strong purifying selection stemming from frequency-dependent predation and positive assortative mating. Here, we integrate data from field surveys, predation experiments, population genomics, and phenotypic correlations to explain the origin and maintenance of geographic variation in a diet-based larval pigmentation trait in the redheaded pine sawfly (Neodiprion lecontei), a pine-feeding hymenopteran. Although our experiments c…

varoitusvärimäntypistiäisetecological geneticsPopulationFREQUENCY-DEPENDENT SELECTIONevoluutioAposematismPredationravintoNegative selectionchemical defenseGenetic driftAposematismpolytypic colorationGeneticsAnimalsaposematismCOLORPOPULATION-GENETICSmuuntelu (biologia)educationEcology Evolution Behavior and Systematicseducation.field_of_studybiologyPigmentationfungiAssortative matingcarotenoidsfood and beverageshost adaptationbiology.organism_classificationBiological EvolutionHymenopterakarotenoiditREAD ALIGNMENTNeodiprion leconteiSawflyCHEMICAL DEFENSEPhenotypeEvolutionary biologyTRADE-OFFLarvaPredatory Behavior1181 Ecology evolutionary biologySHIFTING BALANCEWOOD TIGER MOTHGeneral Agricultural and Biological SciencesGENETIC CORRELATIONSMULLERIAN MIMICRYEvolution
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